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get_network_term()

get_network_term.Rd

Helper function to generate network terms for STAN

Usage

get_network_term(
  transmission_func = "standard",
  is_distribution = FALSE,
  num_networks = 1,
  veff_params = c(),
  s_var = "s_prime",
  net_var = "A",
  net_index = "network",
  id_var = "id",
  veff_type = c(),
  veff_idx = "id",
  trial_var = "trial",
  time_var = "time_step",
  high_res = F
)

Arguments

transmission_func

simple or complex transmission

is_distribution

did the user supply a posterior distribution for edges

num_networks

integer of number of networks

veff_params

vector of varying effects

s_var

string used to represent s term ("s_prime" or "s_direct")

net_var

string used to represent network variable "A"

net_index

string used to index networks "network"

id_var

string used to index individuals. "id" for tada, need to use "id" and "j" for oada

veff_type

string or character vector of whether veffs are id, trial or both

veff_idx

string used to index parameters for varying effects

trial_var

string used to index trial "trial"

time_var

string used to index time "time_step"

high_res

boolean indicating if high res

Value

string of stan code to be used in the model for calculating network effects